In this paper, we apply wavelet thresholding for removing automatically ground and intermittent clutter (airplane echoes) from wind profiler radar data. Using the concept of discrete multi-resolution analysis and non-parametric estimation theory, we develop wavelet domain thresholding rules, which allow us to identify the coefficients relevant for clutter and to suppress them in order to obtain filtered reconstructions.<br><br><b>Key words. </b>Meteorology and atmospheric dynamics (instruments and techniques) – Radio science (remote sensing; signal processing)